| 0 | - | cover | 1 | pencils: Massimo Carnevale; inks: Massimo Carnevale; colors: Massimo Carnevale | Dr. Allison Mann |
| 1 | - | credits, title page | 4 | letters: typeset | |
| 2 | - | cover reprint (on interior page) | 1 | pencils: Massimo Carnevale; inks: Massimo Carnevale; colors: Massimo Carnevale | |
| 3 | Paper Dolls Chapter One | comic story | 22 | script: Brian K. Vaughan; pencils: Pia Guerra; inks: José Marzán Jr.; colors: Zylonol; letters: Clem Robins | Paloma West; Yorick Brown; Ampersand; Captain Belleville; Rose Copen; Agent 355; Dr. Allison Mann |
| 4 | - | cover reprint (on interior page) | 1 | pencils: Massimo Carnevale; inks: Massimo Carnevale; colors: Massimo Carnevale | Agent 355 |
| 5 | Paper Dolls Chapter Two | comic story | 22 | script: Brian K. Vaughan; pencils: Pia Guerra; inks: José Marzán Jr.; colors: Zylonol; letters: Clem Robins | Yorick Brown; Agent 355; Paloma West; Rose Copen; Dr. Allison Mann; Ampersand |
| 6 | - | cover reprint (on interior page) | 1 | pencils: Massimo Carnevale; inks: Massimo Carnevale; colors: Massimo Carnevale | |
| 7 | Paper Dolls Conclusion | comic story | 22 | script: Brian K. Vaughan; pencils: Pia Guerra, Goran Sudžuka; inks: José Marzán Jr.; colors: Zylonol; letters: Clem Robins | Rose Copen; Dr. Allison Mann; Yorick Brown; Agent 355; Congresswoman Jennifer Brown; Alter |
| 8 | - | cover reprint (on interior page) | 1 | pencils: Massimo Carnevale; inks: Massimo Carnevale; colors: Massimo Carnevale | |
| 9 | The Hour of Our Death | comic story | 22 | script: Brian K. Vaughan; pencils: Goran Sudžuka; inks: José Marzán Jr.; colors: Zylonol; letters: Clem Robins | Hero Brown; Beth; Sister Lucia Ober; Yorick Brown |
| 10 | - | cover reprint (on interior page) | 1 | pencils: Massimo Carnevale; inks: Massimo Carnevale; colors: Massimo Carnevale | Agent 355 |
| 11 | Buttons | comic story | 22 | script: Brian K. Vaughan; pencils: Goran Sudžuka; inks: José Marzán Jr.; colors: Zylonol; letters: Clem Robins | Yorick Brown; Agent 355; Rose Copen; Dr. Allison Mann; Agent 86 (flashback); Agent 3 (flashback); Agent 1033 |
| 12 | - | cover reprint (on interior page) | 1 | pencils: Massimo Carnevale; inks: Massimo Carnevale; colors: Massimo Carnevale | Ampersand |
| 13 | 1,000 Typewriters | comic story | 22 | script: Brian K. Vaughan; pencils: Goran Sudžuka; inks: José Marzán Jr.; colors: Zylonol; letters: Clem Robins | Ampersand; Yorick Brown; Dr. Allison Mann; Agent 355; Toyota |
| 14 | Kimono Dragons Part One | cover reprint (on interior page) | 1 | pencils: Massimo Carnevale; inks: Massimo Carnevale; colors: Massimo Carnevale | Yorick Brown; Ampersand |
| 15 | Kimono Dragons Chapter One | comic story | 22 | script: Brian K. Vaughan; pencils: Pia Guerra; inks: José Marzán Jr.; colors: Zylonol; letters: Clem Robins | Rose Copen; Dr. Allison Mann; Ampersand; Yorick Brown; Agent 355; Toyota |
| 16 | - | cover reprint (on interior page) | 1 | pencils: Massimo Carnevale; inks: Massimo Carnevale; colors: Massimo Carnevale | |
| 17 | Kimono Dragons Chapter Two | comic story | 22 | script: Brian K. Vaughan; pencils: Pia Guerra; inks: José Marzán Jr.; colors: Zylonol; letters: Clem Robins | Beth; Beth junior; Hero Brown; Natalya Zamyatin; Yorick Brown; Ampersand; Agent 355; Rose Copen; Dr. Allison Mann [Ayuko Matsumori]; You; Zumi; Epiphany; Dr. Matsumori |
| 18 | - | cover reprint (on interior page) | 1 | pencils: Massimo Carnevale; inks: Massimo Carnevale; colors: Massimo Carnevale | Ampersand |
| 19 | Kimono Dragons Chapter Three | comic story | 22 | script: Brian K. Vaughan; pencils: Pia Guerra; inks: José Marzán Jr.; colors: Zylonol; letters: Clem Robins | President Margaret Valentine; Jennifer Brown; Yorick Brown; Ampersand; Agent 355; Rose Copen; Dr. Allison Mann [Ayuko Matsumori]; Dr. Matsumori; Zumi; Epiphany; You; Kurombo |
| 20 | - | cover reprint (on interior page) | 1 | pencils: Massimo Carnevale; inks: Massimo Carnevale; colors: Massimo Carnevale | Toyota; Ampersand |
| 21 | Kimono Dragons Conclusion | comic story | 23 | script: Brian K. Vaughan; pencils: Pia Guerra, Goran Sudžuka; inks: José Marzán Jr.; colors: Zylonol; letters: Clem Robins | Yorick Brown; Agent 355; Toyota; Dr. Allison Mann [Ayuko Matsumori]; Dr. Matsumori; Ampersand; Epiphany; Zumi; Rose Copen; President Margaret Valentine; Jennifer Brown; You; Hero Brown; Beth; Natalya Zamyatin; Ciba Weber; Vladimir Weber; Heather Hartle; Heidi Hartle; Alter Tse'Elon |
| 22 | - | cover reprint (on interior page) | 1 | pencils: Massimo Carnevale; inks: Massimo Carnevale; colors: Massimo Carnevale | Allison Mann |
| 23 | The Tin Man | comic story | 22 | script: Brian K. Vaughan; pencils: Goran Sudžuka; inks: José Marzán Jr.; colors: Zylonol; letters: Clem Robins | Yorick Brown; Agent 355; Ampersand; Dr. Allison Mann [Ayuko Matsumori]; Lt. Rose Copen; Mrs. Dr. Matsumori (flashback); Dr. Matsumori (flashback); Dr. Ming (flashback); Mercedes (flashback); Karla (flashback); Sunil (flashback) |
| 24 | - | cover reprint (on interior page) | 1 | pencils: Massimo Carnevale; inks: Massimo Carnevale; colors: Massimo Carnevale | Ampersand; Yorick Brown; General Alter Tse'Elon |
| 25 | Gehenna | comic story | 22 | script: Brian K. Vaughan; pencils: Goran Sudžuka; inks: José Marzán Jr.; colors: Zylonol; letters: Clem Robins | Heather Hartle; Heidi Hartle; General Alter Tse'Elon; Rachel Tse'Elon (flashback); Eyad (flashback); Lt. General Yehuda (flashback); Sadie (flashback) |
| 26 | Y: The Script | text story | 14 | script: Brian K. Vaughan | Ampersand; Yorick Brown; Dr. Allison Mann; Agent 355; Toyota |