| 0 | - | cover | 1 | letters: typeset | |
| 1 | Table of Contents | table of contents | 1 | letters: typeset | |
| 2 | Hailing Frequencies Open... | foreword, introduction, preface, afterword | 1 | script: Scott Tipton, David Tipton | |
| 3 | Star Trek #1 | cover reprint (on interior page) | 1 | pencils: ? (photo); inks: ? (photo); colors: ? (photo) | Spock (photo of Leonard Nimoy); James Kirk (photo of William Shatner); Sulu (photo of George Takei) |
| 4 | A Change in Command | text article | 2 | pencils: ? (photo); inks: ? (photo); colors: ? (photo); letters: typeset | Christopher Pike (photo of Jeffrey Hunter); Number One (photo of Majel Barrett); Vina (photo of Susan Oliver); Spock (photo of Leonard Nimoy) |
| 5 | Star Trek: Crew #1 | cover reprint (on interior page) | 1 | pencils: John Byrne; inks: John Byrne; colors: Leonard O'Grady | Number One |
| 6 | Shakedown | comic story | 22 | script: John Byrne; pencils: John Byrne; inks: John Byrne; colors: Mario Boon; letters: Neil Uyetake; editing: Chris Ryall | Number One; Griggs; Philip Boyce; Colin; Charles Rasmussen; Willis; Craddock; McCormick; J. Ramirez; H. Osterman [Kar]; Cho |
| 7 | Crew #1: Shakedown | text article | 1 | script: Scott Tipton, David Tipton | |
| 8 | Star Trek: Crew #2 | cover reprint (on interior page) | 1 | pencils: John Byrne; inks: John Byrne; colors: Tom Smith | Number One; Griggs |
| 9 | The Bottle | comic story | 22 | script: John Byrne; pencils: John Byrne; inks: John Byrne; colors: Tom Smith; letters: Robbie Robbins; editing: Chris Ryall | Number One; Griggs; Burke; Carter; Singh; Breen; Bobby |
| 10 | Crew #2: The Bottle | text article | 1 | script: Scott Tipton, David Tipton | |
| 11 | Star Trek: Crew #3 | cover reprint (on interior page) | 1 | pencils: John Byrne; inks: John Byrne; colors: Tom Smith | Number One |
| 12 | Ghosts | comic story | 23 | script: John Byrne; pencils: John Byrne; inks: John Byrne; colors: Lovern Kindzierski; letters: Neil Uyetake; editing: Chris Ryall | Number One; Lee Bridger; Tom Willis; Patty Willis; Jake Willis; Tulley; Gomez; Sakata; D-12 |
| 13 | Crew #3: Ghosts | text article | 1 | script: Scott Tipton, David Tipton | |
| 14 | Star Trek: Crew #4 | cover reprint (on interior page) | 1 | pencils: John Byrne; inks: John Byrne; colors: Lovern Kindzierski | Number One; Christopher Pike |
| 15 | Shadows of the Past | comic story | 21 | script: John Byrne; pencils: John Byrne; inks: John Byrne; colors: Lovern Kindzierski; letters: Neil Uyetake; editing: Chris Ryall | Number One; Christopher Pike; Robert April; Sarah April; Dorak Luabba; Reed; Gary Seven (flashback); Roberta Lincoln (flashback); Eugene Eckhart (flashback); Baker; Stone; Jorgenson |
| 16 | Crew #4: Shadows of the Past | text article | 1 | script: Scott Tipton, David Tipton | |
| 17 | Star Trek: Crew #5 | cover reprint (on interior page) | 1 | pencils: John Byrne; inks: John Byrne; colors: Lovern Kindzierski | Number One; Christopher Pike |
| 18 | The Ends of Eternity | comic story | 22 | script: John Byrne; pencils: John Byrne; inks: John Byrne; colors: Lovern Kindzierski; letters: Neil Uyetake; editing: Chris Ryall | Number One; Christopher Pike; Spock; Robert April; Sarah April; Namid; Shostov |
| 19 | Crew #5: The Ends of Eternity | text article | 1 | script: Scott Tipton, David Tipton | |
| 20 | Star Trek: Alien Spotlight: the Vulcans #[nn] Cover A | cover reprint (on interior page) | 1 | pencils: Zach Howard; inks: Zach Howard; colors: Leonard O'Grady | Spock |
| 21 | - | comic story | 22 | script: James Patrick; pencils: Josep Maria Beroy; inks: Josep Maria Beroy; colors: Mario Boon, Andrew Elder; letters: Chris Mowry; editing: Andrew Steven Harris | Spock; Christopher Pike; Jose Tyler; Number One; Daniel Reed |
| 22 | Alien Spotlight: Vulcans | text article | 1 | script: Scott Tipton, David Tipton | |
| 23 | Star Trek: Early Voyages #1 | cover reprint (on interior page) | 1 | pencils: Patrick Zircher; inks: Greg Adams | Christopher Pike; Number One [Robbins]; Phil Boyce; Spock |
| 24 | Flesh of My Flesh | comic story | 40 | script: Dan Abnett, Ian Edginton; pencils: Patrick Zircher; inks: Greg Adams; colors: Marie Javins; letters: Janice Chiang; editing: Bobbie Chase | Robert April; Christopher Pike; Moves-With-Burning-Grace; Nils Pitcairn; Number One [Robbins]; Dermot Cusack; Phil Boyce; Gabrielle Carlotti; Jose Tyler; Sita Mohindas; Spock; Nano; Ngultor |
| 25 | Early Voyages 1: Flesh of My Flesh | text article | 1 | script: Scott Tipton, David Tipton | |
| 26 | Star Trek: Early Voyages #2 | cover reprint (on interior page) | 1 | pencils: Patrick Zircher; inks: Greg Adams | Christopher Pike; Number One [Robbins]; Nano; Dermot Cusack; Kaaj |
| 27 | The Fires of Pharos | comic story | 22 | script: Ian Edginton, Dan Abnett; pencils: Patrick Zircher; inks: Greg Adams; colors: Marie Javins; letters: Janice Chiang; editing: Bobbie Chase | Christopher Pike; Number One [Robbins]; Spock; Jose Tyler; Dermot Cusack; Gabrielle Carlotti; Philip Boyce; Nano; Moves-with-Burning Grace; Sita Mohindas; Hal Wyeth; Kaaj |
| 28 | Early Voyages 2: The Fires of Pharos | text article | 1 | script: Scott Tipton, David Tipton | |
| 29 | Star Trek: Early Voyages #3 | cover reprint (on interior page) | 1 | pencils: Patrick Zircher; inks: Greg Adams | Christopher Pike |
| 30 | Our Dearest Blood | comic story | 22 | script: Ian Edginton, Dan Abnett; pencils: Patrick Zircher; inks: Greg Adams; colors: Marie Javins; letters: Janice Chiang; editing: Bobbie Chase | Christopher Pike; Dermot Cusack (death); Philip Boyce; Number One [Robbins]; Spock; Jose Tyler; Nano; Sita Mohindas; Gabrielle Carlotti; Moves-with-Burning Grace; Etashnan; Talza |
| 31 | Early Voyages 3: Our Dearest Blood | text article | 1 | script: Scott Tipton, David Tipton | |
| 32 | Star Trek: Early Voyages #4 | cover reprint (on interior page) | 1 | pencils: Patrick Zircher; inks: Greg Adams | Christopher Pike |
| 33 | Nor Iron Bars a Cage | comic story | 22 | script: Dan Abnett, Ian Edginton; pencils: Patrick Zircher; inks: Greg Adams; colors: Marie Javins; letters: Janice Chiang; editing: Bobbie Chase | Christopher Pike; Number One [Robbins]; Mia Colt; Philip Boyce; Nano; Moves-with-Burning Grace; Sita Mohindas; Jose Tyler; Vina |
| 34 | Early Voyages 4: Nor Iron Bars a Cage | text article | 1 | script: Scott Tipton, David Tipton | |
| 35 | Star Trek: Early Voyages #5 | cover reprint (on interior page) | 1 | pencils: Patrick Zircher; inks: Greg Adams | Spock; Mia Colt; Sutek |
| 36 | Cloak & Dagger [Part 1] | comic story | 22 | script: Dan Abnett, Ian Edginton; pencils: Patrick Zircher; inks: Greg Adams; colors: Marie Javins; letters: Janice Chiang; editing: Bobbie Chase | Christopher Pike; Spock; Philip Boyce; Mia Colt; Number One [Robbins]; Nano; Jose Tyler; Sita Mohindas; Sutek; T'Kell; Tagok; John Stone |
| 37 | Early Voyages 5: Cloak and Dagger | text article | 1 | script: Scott Tipton, David Tipton | |
| 38 | Star Trek: Early Voyages #6 | cover reprint (on interior page) | 1 | pencils: Patrick Zircher; inks: Greg Adams | Spock; T'Kell |
| 39 | Cloak & Dagger, Part 2 | comic story | 22 | script: Dan Abnett, Ian Edginton; pencils: Patrick Zircher; inks: Greg Adams; colors: Marie Javins; letters: Janice Chiang; editing: Bobbie Chase | Christopher Pike; Spock; Number One [Robbins]; Sita Mohindas; Nano; Jose Tyler; Philip Boyce; Mia Colt; Moves-with-Burning Grace; Gabrielle Carlotti; Sutek; T'Kell; Tagok; John Stone |
| 40 | Early Voyages 6: Cloak and Dagger Part 2 | text article | 1 | script: Scott Tipton, David Tipton | |
| 41 | Interview with John Byrne | text article | 1 | script: John Byrne | |