| 0 | Civil War | cover | 1 | pencils: John Watson; inks: John Watson; colors: John Watson | Captain America [Steve Rogers]; Wolverine [Logan]; Human Torch [Johnny Storm]; Ben Urich; Sally Floyd; Goliath [Bill Foster]; Iron Man [Tony Stark]; Colossus; Spider-Man [Peter Parker]; Sentry |
| 1 | - | credits, title page | 3 | pencils: Ramón Bachs; inks: John Lucas; colors: Laura Martin | |
| 2 | Civil War | cover reprint (on interior page) | 1 | pencils: John Watson; inks: John Watson; colors: John Watson | Captain America [Steve Rogers]; Wolverine [Logan]; Human Torch [Johnny Storm]; Ben Urich; Sally Floyd; Goliath [Bill Foster]; Iron Man [Tony Stark]; Colossus; Spider-Man [Peter Parker]; Sentry |
| 3 | Embedded, Part One | comic story | 18 | script: Paul Jenkins; pencils: Ramón Bachs; inks: John Lucas; colors: Laura Martin; letters: VC's Cory Petit | Ben Urich; Joe Robertson; Sally Floyd; Spider-Man [Peter Parker]; Iron Man [Tony Stark] |
| 4 | The Accused, Part One | comic story | 11 | script: Paul Jenkins; pencils: Steve Lieber; inks: Steve Lieber; colors: June Chung; letters: VC's Cory Petit | Robbie Baldwin; Eric Marshall |
| 5 | - | comic story | 3 | script: Paul Jenkins; pencils: Kei Kobayashi; inks: Kei Kobayashi; colors: Christina Strain; letters: VC's Cory Petit | Spider-Man [Peter Parker] |
| 6 | Civil War | cover reprint (on interior page) | 1 | pencils: John Watson; inks: John Watson; colors: John Watson | Spider-Man [Peter Parker]; Iron Man [Tony Stark]; J. Jonah Jameson |
| 7 | Embedded, Part Two | comic story | 14 | script: Paul Jenkins; pencils: Ramón Bachs; inks: John Lucas; colors: Laura Martin; letters: VC's Randy Gentile | Ben Urich; Peter Parker; Sally Floyd; Firestar; J. Jonah Jameson; Joe Robertson; Prodigy; Iron Man [Tony Stark] |
| 8 | The Accused, Part Two | comic story | 9 | script: Paul Jenkins; pencils: Steve Lieber; inks: Steve Lieber; colors: June Chung; letters: VC's Randy Gentile | Robbie Baldwin |
| 9 | Civil War: The Program | comic story | 4 | script: Paul Jenkins; pencils: Leandro Fernández; inks: Leandro Fernández; colors: Dan Brown; letters: VC's Randy Gentile | Spider-Man [Peter Parker]; Norman Osborn |
| 10 | - | comic story | 5 | script: Paul Jenkins; pencils: Kano; inks: Kano; colors: Dean White; letters: VC's Randy Gentile | Iron Man [Tony Stark]; Julius Caesar |
| 11 | Civil War | cover reprint (on interior page) | 1 | pencils: John Watson; inks: John Watson; colors: John Watson | Speedball [Robbie Baldwin] |
| 12 | Embedded, Part Three | comic story | 12 | script: Paul Jenkins; pencils: Ramón Bachs; inks: John Lucas; colors: Laura Martin; letters: VC's Randy Gentile | Sally Floyd; Typeface; Solo; Mr. Fantastic [Reed Richards]; Ben Urich; Thunderclap; Bantam (Death) |
| 13 | The Accused, Part Three | comic story | 9 | script: Paul Jenkins; pencils: Steve Lieber; inks: Steve Lieber; colors: June Chung; letters: VC's Randy Gentile | Robbie Baldwin; She-Hulk [Jennifer Walters]; Toomey; Hickey |
| 14 | Sleeper Cell, Part One | comic story | 7 | script: Paul Jenkins; pencils: Lee Weeks; inks: Rob Campanella; colors: Sotocolor's J. Brown; letters: VC's Randy Gentile | Donna; Keith Dixon; Karen Mason; Joe; Maria |
| 15 | - | comic story | 4 | script: Paul Jenkins; pencils: David Aja; inks: David Aja; colors: José Villarrubia; letters: VC's Randy Gentile | Captain America [Steve Rogers] |
| 16 | Civil War | cover reprint (on interior page) | 1 | pencils: John Watson; inks: John Watson; colors: John Watson | Ben Urich; Green Goblin [Norman Osborn] |
| 17 | Embedded, Part Four | comic story | 13 | script: Paul Jenkins; pencils: Ramón Bachs; inks: John Lucas; colors: Laura Martin; letters: VC's Randy Gentile | Ben Urich; Sally Floyd; Network; Typeface; Battlestar; Ultra-Girl; Gladiatrix; Shamrock; Iron Man [Tony Stark]; Ms. Marvel [Carol Danvers]; Wonder Man; S.H.I.E.L.D.; Green Goblin [Norman Osborn] (villain); Silver Surfer (cameo flashback) |
| 18 | The Accused, Part Four | comic story | 9 | script: Paul Jenkins; pencils: Steve Lieber; inks: Steve Lieber; colors: June Chung; letters: VC's Randy Gentile | Robbie Baldwin |
| 19 | Sleeper Cell, Part Two | comic story | 5 | script: Paul Jenkins; pencils: Lee Weeks; inks: Rob Campanella; colors: Sotocolor's J. Brown; letters: VC's Randy Gentile | Keith Dixon; Karen Mason; Joe [an Atlantean] (cameo); Namor, the Sub-Mariner (cameo flashback) |
| 20 | - | comic story | 5 | script: Paul Jenkins; pencils: Sean Chen; inks: Rick Magyar; colors: Sotocolor's A. Crossley; letters: VC's Randy Gentile | Ms. Marvel [Carol Danvers] (cameo); Iron Man [Tony Stark] (cameo); Wonder Man (cameo); S.H.I.E.L.D. (cameo); Sally Floyd (cameo); Network (cameo); Typeface (cameo); Battlestar (cameo); Shamrock (cameo); Gladiatrix (cameo); Ultra-Girl (cameo); Solo (cameo) |
| 21 | Civil War | cover reprint (on interior page) | 1 | pencils: John Watson; inks: John Watson; colors: John Watson | Iron Man [Tony Stark]; Ms. Marvel [Carol Danvers]; Wonder Man; S.H.I.E.L.D. |
| 22 | Embedded, Part Five | comic story | 12 | script: Paul Jenkins; pencils: Ramón Bachs; inks: John Lucas; colors: Laura Martin; letters: VC's Randy Gentile | Ben Urich; Sally Floyd; J. Jonah Jameson; Robbie Robertson; Steve Rogers [Captain America; Unrevealed]; SHIELD; Green Goblin [Norman Osborn; in flashback] (villain) |
| 23 | The Accused, Part Five | comic story | 9 | script: Paul Jenkins; pencils: Steve Lieber; inks: Steve Lieber; colors: June Chung; letters: VC's Randy Gentile | Robbie Baldwin; She-Hulk [Jennifer Walters]; Typeface; Coldblood; Living Mummy; S.H.I.E.L.D. |
| 24 | Sleeper Cell, Part Three | comic story | 7 | script: Paul Jenkins; pencils: Lee Weeks; inks: Sandu Florea; colors: Sotocolor's J. Brown; letters: VC's Randy Gentile | Wonder Man [Simon Williams]; S.H.I.E.L.D. |
| 25 | - | comic story | 4 | script: Paul Jenkins; pencils: Roy Allen Martinez; inks: Roy Allen Martinez; colors: Sotocolor's A. Crossley; letters: VC's Gent | Spider-Man [Peter Parker] (cameo); Iron Man [Tony Stark] (cameo); Wildstreak (cameo); Phone Ranger (cameo); Lightbright (cameo); Lectronn (cameo); Aunt May (cameo); Mary Jane Watson (cameo) |
| 26 | Civil War | cover reprint (on interior page) | 1 | pencils: John Watson; inks: John Watson; colors: John Watson | Speedball |
| 27 | Embedded, Part Six | comic story | 12 | script: Paul Jenkins; pencils: Ramón Bachs; inks: John Lucas; colors: Laura Martin; letters: VC's Randy Gentile | Ben Urich; Robbie Robertson; Sally Floyd; Mr. Fantastic [Reed Richards]; Yellowjacket [Henry Pym]; Goliath [Bill Foster]; Nighthawk; Thor clone; Iron Man [Tony Stark] |
| 28 | The Accused, Part Six | comic story | 9 | script: Paul Jenkins; pencils: Steve Lieber; inks: Steve Lieber; colors: June Chung; letters: VC's Randy Gentile | Robbie Baldwin; Mr. Fantastic [Reed Richards]; She-Hulk [Jennifer Walters] |
| 29 | Sleeper Cell, Part Four | comic story | 7 | script: Paul Jenkins; pencils: Lee Weeks; inks: Sandu Florea; colors: Sotocolor's J. Brown; letters: VC's Randy Gentile | Wonder Man [Simon Williams] |
| 30 | - | comic story | 4 | script: Paul Jenkins; pencils: Jorge Lucas; inks: Jorge Lucas; colors: Jorge Lucas; letters: VC's Gent | Nighthawk; Captain America [Steve Rogers] |
| 31 | Speedball | character profile | 2 | pencils: Skottie Young, Steve Lieber, Steve Ditko, Darick Robertson; inks: Steve Lieber | |
| 32 | - | promo (ad from the publisher) | 2 | | |