| 0 | Secret Invasion | cover | 1 | pencils: Greg Horn; inks: Greg Horn; colors: Greg Horn | Ms. Marvel (a Skrull) |
| 1 | Title Page and Credits | credits, title page | 3 | pencils: Adriana Melo; inks: Mariah Benes; colors: Chris Sotomayor | |
| 2 | Previously | recap | 1 | pencils: Frank Cho; inks: Frank Cho | |
| 3 | - | cover reprint (on interior page) | 1 | pencils: Greg Horn; inks: Greg Horn; colors: Greg Horn | Ms. Marvel (a Skrull) |
| 4 | The Secret Invasion [Part One] | comic story | 31 | script: Brian Reed; pencils: Adriana Melo, Ron Frenz; inks: Mariah Benes, Sal Buscema; colors: Chris Sotomayor; letters: Dave Sharpe | Captain Marvel, Carol Danvers, Iron Man, Mar-Vell, Ms. Marvel, Tony Stark, Simon Williams, Wonder Man |
| 5 | - | cover reprint (on interior page) | 1 | pencils: Greg Horn; inks: Greg Horn; colors: Greg Horn | Carol Danvers, Machine Man, Ms. Marvel, Sleepwalker |
| 6 | Secret Invasion Part Two | comic story | 22 | script: Brian Reed; pencils: Adriana Melo; inks: Mariah Benes; colors: Chris Sotomayor; letters: Dave Sharpe | Carol Danvers, Machine Man, Ms. Marvel, Sleepwalker, Simon Williams, Wonder Man |
| 7 | - | cover reprint (on interior page) | 1 | pencils: Greg Horn; inks: Greg Horn; colors: Greg Horn | Carol Danvers, Ms. Marvel |
| 8 | Secret Invasion Part Three | comic story | 22 | script: Brian Reed; pencils: André Coelho; inks: André Coelho; colors: Chris Sotomayor; letters: Dave Sharpe | Carol Danvers, Machine Man, Ms. Marvel, Sleepwalker, Simon Williams, Wonder Man |
| 9 | - | cover reprint (on interior page) | 1 | pencils: Greg Horn; inks: Greg Horn; colors: Greg Horn | Carol Danvers, Ms. Marvel |
| 10 | Secret Invasion: The Battle of Manhattan | comic story | 23 | script: Brian Reed; pencils: Adriana Melo; inks: Mariah Benes; colors: Chris Sotomayor; letters: Dave Sharpe | Carol Danvers, Ms. Marvel |
| 11 | - | cover reprint (on interior page) | 1 | pencils: Greg Horn; inks: Greg Horn; colors: Greg Horn | Carol Danvers, Ms. Marvel |
| 12 | Secret Invasion: The Battle of Manhattan Part Two | comic story | 23 | script: Brian Reed; pencils: Adriana Melo, Paulo Siqueira; inks: Mariah Benes, Paulo Siqueira; colors: Chris Sotomayor; letters: Dave Sharpe | Carol Danvers, Ms. Marvel |
| 13 | - | cover reprint (on interior page) | 1 | pencils: Greg Horn; inks: Greg Horn; colors: Greg Horn | Carol Danvers, Ms. Marvel |
| 14 | The Battle of Manhattan: Conclusion | comic story | 23 | script: Brian Reed; pencils: Adriana Melo, Paulo Siqueira; inks: Mariah Benes, Paulo Siqueira; colors: Chris Sotomayor; letters: Dave Sharpe | Todd Arliss, Carol Danvers, Ms. Marvel, Tiger Shark |
| 15 | Ms. Marvel #25 & Captain Marvel #1 Combined Variants | cover reprint (on interior page) | 2 | pencils: Terry Dodson; inks: Rachel Dodson; colors: Laura Martin | Captain Marvel, Carol Danvers, Mar-Vell, Ms. Marvel |
| 16 | Ms. Marvel | character profile | 3 | script: Mark O'English, Olivier Coipel; pencils: Roberto de la Torre, Sal Buscema, Paul Smith | Carol Danvers, Ms. Marvel |