| 0 | - | cover | 2 | pencils: Jim Lee; inks: Jim Lee; colors: Frank Cirocco | |
| 1 | - | credits, title page | 1 | letters: typeset | |
| 2 | Introduction | text article | 2 | script: Ralph Macchio; pencils: Dan Lawlis; inks: Russ Heath; colors: Steve Oliff | James Richards; Shigeru Ezaki |
| 3 | Shadowmasters #1 | cover reprint (on interior page) | 2 | pencils: Jim Lee; inks: Jim Lee; colors: Frank Cirocco | |
| 4 | - | credits, title page | 1 | letters: typeset | |
| 5 | Shadows of the Past | comic story | 44 | script: Carl Potts; pencils: Dan Lawlis; inks: Russ Heath; colors: Steve Oliff; letters: Jim Novak; editing: Allen Milgrom | James Richards; Shigeru Ezaki |
| 6 | End Chapter One | credits, title page | 1 | letters: Carl Potts | |
| 7 | Shadowmasters #2 | cover reprint (on interior page) | 2 | pencils: Mark Texeira; inks: Mark Texeira; colors: Mark Texeira | |
| 8 | - | credits, title page | 1 | letters: typeset | |
| 9 | The Invisible Enemy | comic story | 44 | script: Carl Potts; pencils: Dan Lawlis; inks: Tod Smith; colors: Steve Oliff; letters: Jim Novak; editing: Allen Milgrom | |
| 10 | End Chapter Two | credits, title page | 1 | letters: Carl Potts | |
| 11 | Shadowmasters #3 | cover reprint (on interior page) | 2 | pencils: James Sherman; inks: James Sherman; colors: James Sherman | |
| 12 | - | credits, title page | 1 | letters: typeset | |
| 13 | Rise of the Eternal Sun | comic story | 44 | script: Carl Potts; pencils: Dan Lawlis; inks: Russ Heath; colors: Steve Oliff; letters: Jim Novak; editing: Allen Milgrom | |
| 14 | End Chapter Three | credits, title page | 1 | letters: Carl Potts | |
| 15 | Shadowmasters #4 | cover reprint (on interior page) | 2 | pencils: Carl Potts; inks: Carl Potts; colors: Carl Potts | |
| 16 | - | credits, title page | 1 | letters: typeset | |
| 17 | Into the Void | comic story | 44 | script: Carl Potts; pencils: Dan Lawlis; inks: Russ Heath; colors: Steve Oliff; letters: Jim Novak | |
| 18 | End Chapter Four | credits, title page | 2 | letters: Carl Potts | |
| 19 | The Punisher War Journal #1 | cover reprint (on interior page) | 1 | pencils: Carl Potts; inks: Scott Williams | Frank Castle, Punisher |
| 20 | An Eye for an Eye Chapter One Sunday in the Park | comic story | 28 | script: Carl Potts; pencils: Carl Potts, Jim Lee; inks: Jim Lee; colors: John Wellington; letters: Jim Novak; editing: Don Daley | Frank Castle, Frank Castle Jr. Death, Lisa Castle Death, Maria Castle Death, David Lieberman, Microchip, Hector Montoya, Matt Murdock, Punisher |
| 21 | - | illustration | 1 | pencils: Carl Potts; inks: Jim Lee | |
| 22 | The Punisher War Journal #2 | cover reprint (on interior page) | 1 | pencils: Carl Potts, Jim Lee; inks: Carl Potts | Frank Castle, Daredevil, Matt Murdock, Punisher |
| 23 | An Eye for an Eye Chapter Two Tie a Yellow Ribbon | comic story | 26 | script: Carl Potts; pencils: Carl Potts, Jim Lee; inks: Jim Lee; colors: Gregory Wright; letters: Jim Novak; editing: Don Daley | Frank Castle, Frank Castle Jr. Death, Lisa Castle Death, Maria Castle, Daredevil, Jason Hunt, David Lieberman, Microchip, Hector Montoya, Matt Murdock, Punisher |
| 24 | The Punisher War Journal #3 | cover reprint (on interior page) | 1 | pencils: Carl Potts, Jim Lee; inks: Carl Potts | Frank Castle, Jason Hunt, Hector Montoya, Punisher |
| 25 | An Eye For an Eye Chapter Three A Dish Best Served Cold | comic story | 24 | script: Carl Potts; pencils: Carl Potts, Jim Lee; inks: Jim Lee; colors: Gregory Wright; letters: Jim Novak; editing: Don Daley | Frank Castle, Frank Castle Jr. Death, Lisa Castle Death, Maria Castle Death, Daredevil, Forrest Hunt, Jason Hunt, David Lieberman, Microchip, Hector Montoya Death, Matt Murdock, Punisher |
| 26 | Excerpt from Punisher War Journal #6 | comic story | 1 | script: Carl Potts; pencils: Carl Potts, Jim Lee; inks: Jim Lee; colors: Gregory Wright; letters: Jim Novak; editing: Don Daley | Frank Castle, Yuriko Ezaki, David Lieberman, Logan, Microchip, Punisher, Phillip Richards, Wolverine, Hatsu Yakamoto |
| 27 | The Punisher War Journal #8 | cover reprint (on interior page) | 1 | pencils: Jim Lee; inks: Klaus Janson | Punisher |
| 28 | Damage | comic story | 22 | script: Carl Potts; pencils: Jim Lee; inks: Jim Lee; colors: Gregory Wright; letters: Jim Novak; editing: Don Daley | Punisher; Shadowmasters [Hatsu Yakamoto; Yuriko; Manzo]; Phillip; Damage (villain); Bunsen Burner Gang (villains); Sunrise Assassin (villain) |
| 29 | The Punisher War Journal #9 | cover reprint (on interior page) | 1 | pencils: Jim Lee; inks: Jim Lee | Punisher |
| 30 | Guilt Trip | comic story | 22 | script: Carl Potts; pencils: Jim Lee; inks: Jim Lee; colors: Gregory Wright; letters: Jim Novak; editing: Don Daley | Punisher; Black Widow [Natasha Romanov]; Yuriko Ezaki; Rikichi; Phillip Richards; Manzo |
| 31 | Punisher's Arsenal | character profile | 1 | script: Eliot R. Brown; pencils: Eliot R. Brown; inks: Eliot R. Brown; letters: Eliot R. Brown | |
| 32 | The Punisher #24 | cover reprint (on interior page) | 1 | pencils: Erik Larsen; inks: Scott Williams | Frank Castle, Yuriko Ezaki, Manzo, Punisher, Hatsu Yakamoto |
| 33 | Land of the Eternal Sun | comic story | 21 | script: Mike Baron; pencils: Erik Larsen; inks: Scott Williams; colors: John Wellington; letters: Ken Bruzenak; editing: Carl Potts | Frank Castle, Yuriko Ezaki, Iris Green, Manzo, Punisher, Phillip Richards, Hatsu Yakamoto, Katherine Yakamoto |
| 34 | The Punisher #25 | cover reprint (on interior page) | 1 | pencils: Erik Larsen; inks: Hilary Barta | Frank Castle, Iris Green, Punisher, Katherine Yakamoto |
| 35 | Sunset in Kansas | comic story | 40 | script: Mike Baron; pencils: Erik Larsen; inks: Al Williamson; colors: John Wellington; letters: Ken Bruzenak; editing: Carl Potts | Frank Castle, Yuriko Ezaki, Iris Green, Manzo, Punisher, Phillip Richards, Hatsu Yakamoto Death, Katherine Yakamoto |
| 36 | Shadowmasters Pages 3-6 and 41 & 46 Original Art by Dan Lawlis & Russ Heath | illustration | 1.5 | pencils: Dan Lawlis; inks: Russ Heath; letters: Jim Novak | |
| 37 | Shadowmasters #1 Cover Art by Jim Lee & Frank Cirocco | cover reprint (on interior page) | 0.5 | pencils: Jim Lee; inks: Jim Lee; colors: Frank Cirocco | |
| 38 | Shadowmasters #2 Cover Art by Mark Texeira | cover reprint (on interior page) | 0.5 | pencils: Mark Texeira; inks: Mark Texeira; colors: Mark Texeira | |
| 39 | Shadowmasters #4 Cover Art by Carl Potts | cover reprint (on interior page) | 0.5 | pencils: Carl Potts; inks: Carl Potts; colors: Carl Potts | |
| 40 | Shadowmasters Marvel Age #78 Article by Barry Dutter | text article | 1 | script: Barry Dutter; pencils: Dan Lawlis; inks: Tod Smith; colors: Steve Oliff | Shadowmasters |
| 41 | - | cover reprint (on interior page) | 1 | pencils: Jim Lee; inks: Jim Lee; colors: Frank Cirocco | |