| 0 | - | cover | 1 | pencils: Stuart Immonen; inks: Stuart Immonen; colors: Laura Martin | Ben Grimm, Human Torch, Invisible Girl, Mister Fantastic, Reed Richards, Susan Storm Richards, Johnny Storm, The Thing |
| 1 | Previously In Ultimate Fantastic Four: | recap | 1 | script: Warren Ellis; pencils: Stuart Immonen; inks: Wade von Grawbadger; colors: Dave Stewart | |
| 2 | Doom: Part 1 | comic story | 21 | script: Warren Ellis; pencils: Stuart Immonen; inks: Wade von Grawbadger; colors: Dave Stewart; letters: Chris Eliopoulos | Fantastic Four [Mister Fantastic; Human Torch [Johnny Storm; Thing; Invisible Girl]; Man-Thing; Doctor Franklin Storm; Werner Van Damme (flashback); Doctor Doom [Victor Van Damme] |
| 3 | - | in-house column | 1 | script: Joe Quesada | Joe Quesada (illo); Spider-Man (illo) |
| 4 | - | cover reprint (on interior page) | 2 | pencils: Stuart Immonen; inks: Stuart Immonen; colors: Laura Martin | Fantastic Four [Human Torch [Johnny Storm]; Thing; Invisible Girl; Mister Fantastic] |
| 5 | Marvel Flip Magazine Checklist | promo (ad from the publisher) | 1 | letters: typeset | |
| 6 | Previously ... | recap | 1 | letters: typeset | X-Men [Professor X; Cyclops; Marvel Girl; Storm; Beast; Colossus; Iceman; Wolverine [Logan]; Nightcrawler]; Colonel John Wraith |
| 7 | Return to Weapon X Part One of Six | comic story | 22 | script: Mark Millar; pencils: Adam Kubert; inks: Art Thibert; colors: Richard Isanove; letters: Richard Starkings, Comicraft's Wes Abbott, Comicraft | X-Men [Wolverine [Logan]; Beast; Storm; Marvel Girl; Cyclops; Professor X; Iceman; Colossus]; Nightcrawler (introduction); Rogue (introduction); Colonel John Wraith; Dr. Cornelius; Linklater |
| 8 | - | cover | 1 | pencils: Adam Kubert; colors: Richard Isanove | Nightcrawler, Kurt Wagner |