| 0 | - | cover | 1 | pencils: Mike Deodato Jr.; inks: Mike Deodato Jr.; colors: Hermes Tadeo | Wolverine [Logan]; Punisher [Frank Castle] |
| 1 | - | credits, title page | 2 | letters: typeset | |
| 2 | The Punisher War Journal #6 | cover reprint (on interior page) | 1 | pencils: Jim Lee; inks: Jim Lee | Logan, Wolverine |
| 3 | - | credits, title page | 1 | letters: typeset | |
| 4 | On the Track of Unknown Animals | comic story | 22 | script: Carl Potts; pencils: Carl Potts, Jim Lee; inks: Jim Lee; colors: Gregory Wright; letters: Jim Novak; editing: Don Daley | Frank Castle, Yuriko Ezaki, David Lieberman, Logan, Microchip, Punisher, Phillip Richards, Wolverine, Hatsu Yakamoto |
| 5 | The Punisher War Journal #7 | cover reprint (on interior page) | 1 | pencils: Jim Lee; inks: Carl Potts | Frank Castle, Logan, Punisher, Wolverine |
| 6 | - | credits, title page | 1 | letters: typeset | |
| 7 | Endangered Species | comic story | 22 | script: Carl Potts; pencils: Carl Potts, Jim Lee; inks: Jim Lee; colors: Gregory Wright; letters: Jim Novak; editing: Don Daley | Frank Castle, Logan, Punisher, Wolverine |
| 8 | Wolverine and the Punisher: Damaging Evidence #1 | cover reprint (on interior page) | 1 | pencils: Gary Erskine; inks: Gary Erskine | Wolverine; Punisher |
| 9 | Damaging Evidence Part 1 | comic story | 21 | script: Carl Potts; pencils: Gary Erskine; inks: Gary Erskine; colors: Marie Javins; letters: Richard Starkings, John Gaushell; editing: Greg Wright, Rob Tokar | Wolverine; Punisher; GUEST: Microchip; VILLAINS: Kingpin; Donald Pierce; Murray Reese; Damage |
| 10 | Wolverine and the Punisher: Damaging Evidence #2 | cover reprint (on interior page) | 1 | pencils: Gary Erskine; inks: Gary Erskine | Wolverine; Punisher |
| 11 | Damaging Evidence Part 2 | comic story | 21 | script: Carl Potts; pencils: Gary Erskine; inks: Gary Erskine; colors: Marie Javins; letters: Richard Starkings, John Gaushell; editing: Greg Wright, Rob Tokar | Wolverine; Punisher; VILLAINS: Kingpin; Sniper; Damage |
| 12 | Wolverine and the Punisher: Damaging Evidence #3 | cover reprint (on interior page) | 1 | pencils: Gary Erskine; inks: Gary Erskine | Wolverine; Punisher |
| 13 | Damaging Evidence Part 3 | comic story | 23 | script: Carl Potts; pencils: Gary Erskine; inks: Gary Erskine; colors: Marie Javins, Pat Garrahy, Chris Matthys; letters: Richard Starkings, John Gaushell; editing: Greg Wright, Rob Tokar | Wolverine; Punisher; Kingpin (villain); Sniper (villain); Damage (villain); Donald Pierce (villain) |
| 14 | The Punisher: War Zone #19 | cover reprint (on interior page) | 1 | pencils: Michael Golden; inks: Michael Golden | Punisher; Wolverine; Jack Oonuk |
| 15 | The Jericho Syndrome Part 3 | comic story | 21 | script: Dan Abnett, Andy Lanning; pencils: Hugh Haynes; inks: Rodney Ramos; colors: Kevin Tinsley; letters: Michael Higgins; editing: Don Daley | Punisher; Wolverine; Jack Oonuk; Wrench (villain); The Architect (villain); Architect's Goons (villains) |
| 16 | Punisher Gallery | illustration | 1 | pencils: Hoang Nguyen; inks: Bud La Rosa | |
| 17 | Wolverine / Punisher: Revelation #1 | cover reprint (on interior page) | 1 | pencils: Pat Lee; inks: Alvin Lee | Punisher; Wolverine |
| 18 | Chapter One: Ladies in Waiting | comic story | 22 | script: Tom Sniegoski, Christopher Golden; pencils: Pat Lee; inks: Alvin Lee; colors: Angelo Tsang, Pat Lee; letters: Richard Starkings, Comicraft; editing: Joe Quesada, Jimmy Palmiotti | Punisher [Frank Castle]; Wolverine [Logan; James Howlett]; Lucy Santini Mellace; Caley Blair (death); Council of Thrones; Revelation |
| 19 | Wolverine / Punisher: Revelation #2 | cover reprint (on interior page) | 1 | pencils: Pat Lee; inks: Alvin Lee | Punisher; Wolverine |
| 20 | Chapter Two: Ascension | comic story | 22 | script: Tom Sniegoski, Christopher Golden; pencils: Pat Lee; inks: Alvin Lee; colors: Angelo Tsang, Pat Lee; letters: RS, Comicraft; editing: Jimmy Palmiotti, Joe Q | Punisher [Frank Castle]; Wolverine [Logan; James Howlett]; Lucy Santini Mellace; Caley Blair (flashback); Soteira (hologram); Council of Thrones; Revelation |
| 21 | Wolverine / Punisher: Revelation #3 | cover reprint (on interior page) | 1 | pencils: Pat Lee; inks: Alvin Lee | Punisher; Wolverine; Revelation |
| 22 | Chapter Three: One Shot at Heaven | comic story | 22 | script: Tom Sniegoski, Christopher Golden; pencils: Pat Lee; inks: Alvin Lee, Sigmund Torre; colors: Angelo Tsang; letters: Richard Starkings, Comicraft; editing: Joe Q, Jimmy Palmiotti | Punisher [Frank Castle]; Wolverine [Logan, James Howlett]; Daredevil [Matt Murdock](cameo); Council of Thrones [Ephesus; Arcturus]; Revelation |
| 23 | Wolverine / Punisher: Revelation #4 | cover reprint (on interior page) | 1 | pencils: Pat Lee; inks: Alvin Lee; colors: Dreamwave Colors | Punisher; Wolverine; Revelation |
| 24 | Chapter Four: So This Is Hell | comic story | 22 | script: Tom Sniegoski, Christopher Golden; pencils: Pat Lee; inks: Alvin Lee, Sigmund Torre; colors: Angelo Tsang, Pat Lee; letters: RS, Comicraft; editing: Joe Q, Jimmy Palmiotti | Punisher [Frank Castle]; Wolverine [Logan; James Howlett]; Ororo Munroe [Storm]; Lucy Santini Mellace; Council of Thrones; Revelation (death) |
| 25 | The Punisher #16 | cover reprint (on interior page) | 1 | pencils: Tim Bradstreet; inks: Tim Bradstreet; colors: Tim Bradstreet | Punisher; Wolverine |
| 26 | Vertical Challenge | comic story | 22 | script: Garth Ennis; pencils: Darick Robertson; inks: Darick Robertson; colors: Avalon's Matt Milla; letters: Comicraft's Wes, RS; editing: Stuart Moore | Punisher; Wolverine; Soap; The Mob (villains) |
| 27 | The Punisher #17 | cover reprint (on interior page) | 1 | pencils: Tim Bradstreet; inks: Tim Bradstreet; colors: Tim Bradstreet | Punisher; Wolverine |
| 28 | Aim Low | comic story | 22 | script: Garth Ennis; pencils: Darick Robertson; inks: Darick Robertson; colors: Avalon's Matt Milla; letters: Comicraft's Wes, RS; editing: Stuart Moore | Punisher; Wolverine (guest); Tony Casino (villain, death); The Mob (villains) |
| 29 | Wolverine #186 | cover reprint (on interior page) | 1 | pencils: Esad Ribić; inks: Esad Ribić; colors: Esad Ribić | Wolverine |
| 30 | See Ya Around, Frankie | comic story | 21 | script: Frank Tieri; pencils: Terry Dodson; inks: Rachel Dodson; colors: Avalon's Ed Tadeo; letters: Richard Starkings, Comicraft's Jimmy, Comicraft's Wes; editing: Axel Alonso | Wolverine; Punisher |
| 31 | Wolverine / Punisher #1 | cover reprint (on interior page) | 1 | pencils: Mike Deodato Jr.; inks: Mike Deodato Jr.; colors: Hermes Tadeo | Wolverine; Punisher |
| 32 | Part One: Napoleon | comic story | 22 | script: Peter Milligan; pencils: Lee Weeks; inks: Tom Palmer; colors: Dean White; letters: Virtual Calligraphy's Randy Gentile; editing: Axel Alonso | Wolverine (Cameo); Punisher; VILLAINS: Napoleon [Oswald Zinn](Origin); Gottlieb; Harvey Long; Lady [Victoria Lady]; The Demon [Van Daemon]; The Atheist [Gerald O'Higgins]; Books [Waverly Jones]; Erewhon Residents |
| 33 | Wolverine / Punisher #2 | cover reprint (on interior page) | 1 | pencils: Gary Frank; inks: Gary Frank; colors: Edgar Delgado | Wolverine; Punisher |
| 34 | Part Two: The Lady, the Atheist and the Demon | comic story | 22 | script: Peter Milligan; pencils: Lee Weeks; inks: Tom Palmer; colors: Dean White; letters: Virtual Calligraphy's Randy Gentile; editing: Axel Alonso | Wolverine; Punisher; Napoleon [Oswald Zinn] (villain); Gottlieb (villain); Harvey Long (villain, death); Lady [Victoria Lady] (villain); The Demon [Van Daemon] (villain, origin); The Atheist [Gerald O'Higgins] (villain, origin); Books [Waverly Jones] (villain); Erewhon Residents (villains) |
| 35 | Wolverine / Punisher #3 | cover reprint (on interior page) | 1 | pencils: Chris Brunner; inks: Chris Brunner; colors: Edgar Delgado | Wolverine; Punisher |
| 36 | Part Three: Who Are All Those People and Why Are They Shooting at Me? | comic story | 22 | script: Peter Milligan; pencils: Lee Weeks; inks: Tom Palmer; colors: Dean White; letters: Virtual Calligraphy's Randy Gentile; editing: Axel Alonso | Wolverine; Punisher; Napoleon [Oswald Zinn] (villain); Gottlieb (villain); Lady [Victoria Lady] (villain, death); The Demon [Van Daemon] (villain); The Atheist [Gerald O'Higgins] (villain); Books [Waverly Jones] (villain); Erewhon Residents (villains) |
| 37 | Wolverine / Punisher #4 | cover reprint (on interior page) | 1 | pencils: Clayton Crain; inks: Clayton Crain; colors: Clayton Crain | Wolverine |
| 38 | Part Four: The Founding Father | comic story | 22 | script: Peter Milligan; pencils: Lee Weeks; inks: Tom Palmer; colors: Dean White; letters: Virtual Calligraphy's Randy Gentile; editing: Axel Alonso | Wolverine; Punisher; VILLAINS: Napoleon [Oswald Zinn]; Gottlieb; The Demon [Van Daemon]; The Atheist [Gerald O'Higgins]; Books [Waverly Jones]; Erewhon Residents |
| 39 | Wolverine / Punisher #5 | cover reprint (on interior page) | 1 | pencils: Greg Land; inks: Matt Ryan | Wolverine; Punisher |
| 40 | Conclusion: It's a Jungle Out There | comic story | 23 | script: Peter Milligan; pencils: Lee Weeks; inks: Tom Palmer; colors: Dean White; letters: Virtual Calligraphy's Randy Gentile; editing: Axel Alonso | Wolverine; Punisher; Napoleon [Oswald Zinn] (villain, death); Gottlieb (villain, death); The Atheist [Gerald O'Higgins] (villain); Books [Waverly Jones] (villain); Erewhon Residents (villains) |
| 41 | Astonishing Tales #1 | cover reprint (on interior page) | 1 | pencils: Marc Silvestri; inks: Joe Weems; colors: Frank D'Armata | Wolverine; Punisher |
| 42 | Madripoor Mix-Up | comic story | 8 | script: C. B. Cebulski; pencils: Kenneth Rocafort; inks: Kenneth Rocafort; colors: IroBot; letters: Troy Peteri; editing: John Barber | Wolverine (feature); Punisher (feature); Hydra (villains); Viper (villain); Predator X (villain) |
| 43 | The Hard Way | comic story | 8 | script: C. B. Cebulski; pencils: Kenneth Rocafort; inks: Kenneth Rocafort; colors: IroBot; letters: Troy Peteri; editing: John Barber | Wolverine; Punisher; Viper (villain); Kimura (villain); Predator X (villain); Hydra (cameo) |
| 44 | Bloodlines! | comic story | 8 | script: C. B. Cebulski; pencils: Kenneth Rocafort; inks: Kenneth Rocafort; colors: IroBot; letters: Troy Peteri; editing: John Barber | Wolverine; Punisher; Tyger Tiger; Cutie Bunny; Viper (villain); Kimura (villain); Predator X (villain) |
| 45 | Die Hard the Hunter | comic story | 8 | script: C. B. Cebulski; pencils: Kenneth Rocafort; inks: Kenneth Rocafort; colors: IroBot; letters: Troy Peteri; editing: John Barber, Nicole Boose | Wolverine; Punisher; Tyger Tiger; Cutie Bunny; Viper (villain); Kimura (villain); Predator X (villain) |
| 46 | Lowtown Showdown | comic story | 8 | script: C. B. Cebulski; pencils: Kenneth Rocafort; inks: Kenneth Rocafort; colors: IroBot; letters: Troy Peteri; editing: Nicole Boose, John Barber | Wolverine (feature); Punisher (feature); Viper (villain); Kimura (villain); Predator X (villain) |
| 47 | Bloodletting | comic story | 8 | script: C. B. Cebulski, Jim McCann; pencils: Kenneth Rocafort; inks: Kenneth Rocafort; colors: IroBot; letters: Troy Peteri; editing: Nicole Boose, John Barber, Mike Horwitz | Wolverine; Punisher; Tyger Tiger (guest); Viper (villain); Kimura (villain); Predator X (villain); Hydra (villain) |
| 48 | Overstreet's Price Update #7 cover by Jim Lee | cover reprint (on interior page) | 1 | pencils: Jim Lee; inks: Jim Lee | |
| 49 | Punisher and Wolverine in African Saga | cover reprint (on interior page) | 2 | pencils: Jim Lee; inks: Carl Potts; colors: Gregory Wright | Frank Castle, Logan, Punisher, Wolverine |
| 50 | Wolverine / Punisher: A Bad Night for Ninjas | illustration | 2 | pencils: Jim Lee; inks: Jim Lee | |
| 51 | Punisher Annual #2 pinup | illustration | 2 | pencils: Jon Bogdanove; inks: Jon Bogdanove | Frank Castle, Logan, Punisher, Wolverine |
| 52 | Punisher Magazine #15 pinup | illustration | 1 | pencils: Dan Reed; inks: Dan Reed | The Punisher [Frank Castle]; Wolverine |
| 53 | Wolverine / Punisher: Revelation #1 Dynamic Forces Variant | cover reprint (on interior page) | 1 | pencils: Pat Lee; inks: Pat Lee | Wolverine; Punisher |
| 54 | Astonishing Tales #1 | cover reprint (on interior page) | 2 | pencils: Kenneth Rocafort; inks: Kenneth Rocafort | Wolverine; Punisher; Nick Fury; Daredevil; Cannonball; Sunspot; Mojo; Elsa Bloodstone; Iron Man; Modok; Iron Man 2020; Spider-Woman; Meltdown |
| 55 | Astonishing Tales #2 | cover reprint (on interior page) | 1 | pencils: Kenneth Rocafort; inks: Kenneth Rocafort | Wolverine; Punisher; Predator X |
| 56 | Astonishing Tales #4 | cover reprint (on interior page) | 1 | pencils: Kenneth Rocafort; inks: Kenneth Rocafort | Wolverine; Punisher; Daredevil |
| 57 | Astonishing Tales #6 | cover reprint (on interior page) | 1 | pencils: Kenneth Rocafort; inks: Kenneth Rocafort | Wolverine; Punisher; Predator X; Hydra |
| 58 | - | illustration | 1 | pencils: Tim Bradstreet; inks: Tim Bradstreet; colors: Tim Bradstreet | Punisher; Wolverine |