| 0 | - | cover | 2 | pencils: Terry Shoemaker; inks: John Dickenson; colors: Liquid! | |
| 1 | X-Files | foreword, introduction, preface, afterword | 2 | script: Ralph Macchio | |
| 2 | Too Many Mutants | comic story | 24 | script: Chris Claremont; pencils: Whilce Portacio, Klaus Janson, John Byrne, Rick Leonardi, Marc Silvestri, Michael Golden; inks: Scott Williams; colors: Joe Rosas; letters: Tom Orzechowski | X-Men [Storm; Wolverine; Forge; Gambit; Banshee; Psylocke; Jubilee]; Moira MacTaggert; Lila Cheney; Guido; X-Factor [Cyclops; Marvel Girl [Jean Grey]; Iceman; Beast; Archangel]; New Mutants [Cable; Cannonball; Sunspot; Rictor; Boom Boom [Tabitha Smith]]; Shadow King (villain); Magneto (cameo); Iron |
| 3 | Crossroads | comic story | 22 | script: Chris Claremont; pencils: Jim Lee; inks: Scott Williams; colors: Joe Rosas; letters: Pat Brosseau | X-Men [Storm; Wolverine; Rogue; Psylocke; Banshee; Gambit; Forge; Jubilee]; Lila Cheney; Ka-Zar; Zabu; Nick Fury; S.H.I.E.L.D.; Magneto; Manacle; Trish Tilby; Colonel Yuri Vassilyavich Semyanov (villain); Savage Land Mutants [Zaladane; Barbarus; Gaza; Amphibius; Whiteout; Worm; Lupus; Brainchild] (v |
| 4 | The Path Not Taken! | comic story | 40 | script: Chris Claremont; pencils: Jim Lee; inks: Scott Williams, Karl Altstaetter; colors: Glynis Oliver, Joe Rosas; letters: Tom Orzechowski | X-Men [Storm; Wolverine; Psylocke; Forge; Banshee; Gambit; Jubilee]; Nick Fury; Ka-Zar; Shanna; Zabu; Nereel; S.H.I.E.L.D.; Magneto; Deathbird; Manacle; Lilandra; Lila Cheney; Imperial Guard [Gladiator; Titan; Tempest; Bolt; Oracle; Earthquake; Smasher; Warstar]; Zaladane (villain, death); Colonel Y |
| 5 | Double Death | comic story | 23 | script: Chris Claremont; pencils: Jim Lee; inks: Scott Williams; colors: Joe Rosas; letters: Pat Brosseau | X-Men [Professor X; Storm; Wolverine; Psylocke; Banshee; Forge; Gambit; Jubilee]; Deathbird; Lilandra; Oracle; Lila Cheney; Skrull Prime (villain); War-Skrulls (villain); Skrull Professor X (villain); Skrull Psylocke (villain); Skrull Gladiator (villain); Skrull Starjammers [Corsair; Hepzibah; Raza; |
| 6 | Free Charley | comic story | 23 | script: Chris Claremont; pencils: Jim Lee; inks: Scott Williams; colors: Joe Rosas; letters: Tom Orzechowski | X-Men [Professor X; Storm; Wolverine; Psylocke; Banshee; Forge; Gambit; Jubilee]; Deathbird; Oracle; Lila Cheney; Lilandra; Skrull Prime (death, villain); War-Skrulls (deaths, villain); Skrull Professor X (villain); Skrull Psylocke (villain); Skrull Gladiator (villain); Skrull Wolverine (villain); S |
| 7 | Follow Me X-Men--Or Professor X Dies! | cover reprint (on interior page) | 1 | pencils: Jim Lee; inks: Kevin Nowlan; letters: Rick Parker | Lila Cheney; Storm; Wolverine; Psylocke; Cannonball; Jubilee; Jean Grey; Cable; Cyclops; Archangel; Banshee; Gambit; Sunspot |
| 8 | - | cover reprint (on interior page) | 1 | pencils: Jim Lee; inks: Scott Williams | Rogue; Magneto; Nick Fury; Ka-Zar |
| 9 | - | cover reprint (on interior page) | 3 | pencils: Jim Lee; inks: Scott Williams | X-Men [Wolverine; Psylocke; Forge; Storm; Jubilee; Banshee; Gambit; Rogue]; Skrull Professor X; Deathbird; Lilandra; Gladiator; Zaladane; Magneto |
| 10 | Execution! | cover reprint (on interior page) | 1 | pencils: Jim Lee; inks: Scott Williams; letters: Pat Brosseau | Wolverine; Skrull Professor X |
| 11 | - | cover reprint (on interior page) | 1 | pencils: Jim Lee; inks: Scott Williams | Skrull Wolverine; Gambit |