| 0 | Messiah Complex Chapter One | cover | 1 | pencils: David Finch; inks: Danny Miki; colors: Frank D'Armata | X-Men [Nightcrawler [Kurt Wagner]; Emma Frost [White Queen]; Cyclops [Scott Summers]; Wolverine [James Howlett; Logan]; Angel [Warren Worthington III]] |
| 1 | X-Men: Messiah Complex | foreword, introduction, preface, afterword | 1 | colors: ? (Page design colors); letters: typeset | |
| 2 | Chapter One | comic story | 23 | script: Ed Brubaker; pencils: Marc Silvestri, Sheldon Mitchell; inks: Joe Weems, Marco Galli; colors: Frank D'Armata; letters: Chris Eliopoulos | Cyclops [Scott Summers]; Emma Frost; Charles Xavier; Angel [Warren Worthington III]; Wolverine [Logan]; Nightcrawler [Kurt Wagner]; Beast [Hank McCoy]; Predator X (villain); Marauders [Omega Sentinel [Karima Shapandar]; Blockbuster [Michael Baer] (death); Prism (death); Sunfire [Shiro Yoshida]; Scal |
| 3 | Checklist | promo (ad from the publisher) | 1 | colors: ? (Page design color); letters: typeset | |
| 4 | Cyclops | character profile | 1 | pencils: Billy Tan; inks: Billy Tan; colors: Frank D'Armata | Cyclops |
| 5 | File 27: The X-Men | character profile | 1 | pencils: Marko Djurdjević; inks: Marko Djurdjević; colors: Marko Djurdjević | X-Men [Professor X; Cyclops; Emma Frost [White Queen]; Storm; Wolverine; Colossus; Nightcrawler; Kitty Pryde; Angel; Hepzibah; Iceman; Cannonball; Bishop; Warpath; Beast] |
| 6 | File 512: X-Factor | character profile | 1 | pencils: Scot Eaton; inks: John Dell; colors: Brian Reber | X-Factor [Multiple Man [Jamie Madrox]; M [Monet St. Croix]; Layla Miller; Rictor [Julio Esteban Richter]; Siryn [Theresa Rourke Cassidy]; Strong Guy [Guido Carosella]; Wolfsbane [Rahne Sinclair]] |
| 7 | File 432: The New X-Men | character profile | 1 | pencils: Humberto Ramos; inks: Tim Townsend; colors: Morry Hollowell | The New X-Men [X-23; Hellion [Julian Keller]; Surge [Noriko Ashida]; Prodigy [David Alleyne]; Elixir [Josh Foley]; Mercury [Cessily Kincaid]; Rockslide [Santo Vaccarro]; Pixie [Megan Gwynn]; Anole [Victor Borkowski]; Gentle [Nezhno Abidemi]; Dust [Sooraya Qadir]] |
| 8 | File 399: The Marauders | character profile | 2 | pencils: Simone Bianchi; inks: Simone Bianchi, Andrea Silvestri; colors: Simone Peruzzi | The Marauders [Mr. Sinister; Mystique; Random; Prism; Scalphunter; Harpoon; Riptide; Lady Mastermind; Sunfire; Malice [Omega Sentinel]; Scalphunter; Arclight; Vertigo; Riptide; Harpoon; Prism; Blockbuster; Exodus; Tempo] |
| 9 | File 665: The Purifiers | character profile | 1 | pencils: Kaare Andrews; inks: Kaare Andrews; colors: Kaare Andrews | The Purifiers |
| 10 | File 801: Predator X | character profile | 1 | pencils: Trevor Hairsine; inks: Trevor Hairsine; colors: Moose Baumann | Predator X |
| 11 | Things To Come | illustration | 1 | pencils: Greg Land; inks: Jay Leisten; colors: Justin Ponsor | Wolverine [James Howlett; Logan]; X-23; Mystique; Hepzibah; Warpath |
| 13 | X-Men: Messiah Complex Chapter Two | promo (ad from the publisher) | 1 | pencils: David Finch; inks: Danny Miki; colors: Frank D'Armata | X-Men [Angel [Warren Worthington III]; Storm [Ororo Munroe]; Nightcrawler [Kurt Wagner]; Wolverine [James Howlett; Logan]; Colossus [Piotr Rasputin]] |