| 0 | - | cover | 1 | pencils: Joe Quesada; inks: Jimmy Palmiotti; colors: John Cebollero | Ninjak |
| 1 | - | credits, title page | 5 | letters: typeset | |
| 2 | The Birth of Ninjak | foreword, introduction, preface, afterword | 2 | script: Mark A. Moretti | |
| 3 | - | cover reprint (on interior page) | 1 | pencils: Joe Quesada; inks: Jimmy Palmiotti; colors: John Cebollero | Ninjak |
| 4 | Black Water Part One | comic story | 24 | script: Mark A. Moretti; pencils: Joe Quesada; inks: Jimmy Palmiotti; letters: Chris Eliopoulos; editing: Kevin VanHook | Ninjak |
| 5 | - | cover reprint (on interior page) | 1 | pencils: Joe Quesada; inks: Jimmy Palmiotti; colors: Andrew Covalt | Ninjak |
| 6 | Deluge (Black Water Part 2) | comic story | 21 | script: Mark A. Moretti; pencils: Joe Quesada; inks: Jimmy Palmiotti; colors: John Cebollero, Knob Row; letters: Chris Eliopoulos; editing: Tony Bedard | Ninjak |
| 7 | - | cover reprint (on interior page) | 1 | pencils: Joe Quesada; inks: Jimmy Palmiotti; colors: John Cebollero | Michiko Okubo; Ninjak [Colin King] |
| 8 | The 7th Dragon (Part 1) | comic story | 21 | script: Mark A. Moretti; pencils: Joe Quesada; inks: Jimmy Palmiotti; colors: John Cebollero; letters: Chris Eliopoulos; editing: Tony Bedard | Bloodshot; Jillian Alcott; John Sinclair; Jonathan King (in a portrait); Michiko Okubo; Neville Alcott; Ninjak [Colin King]; his Aunt Margaret; Senator Yusaku Okubo; the Seventh Dragon [Goro Sanada]; Shotaro Ishimatsu (Yakuza member); Toshihiro Matsuda (Yakuza leader) |
| 9 | - | cover reprint (on interior page) | 1 | pencils: Mark A. Moretti, Simon Erich; inks: Kathryn Bolinger, Simon Erich; colors: John Cebollero | Michiko Okubo; Ninjak [Colin King] |
| 10 | Dragonslayer; (The 7th Dragon Part 2) | comic story | 21 | script: Mark A. Moretti; pencils: Mark A. Moretti; inks: Kathryn Bolinger, Jenifer Marrus; colors: John Cebollero, Knob Row; letters: Rob Johnson, Santiago Vázquez; editing: Tony Bedard | Michiko Okubo; Ninjak [Colin King]; Senator Yusaku Okubo; the Seventh Dragon [Goro Sanada]; Toshihiro Matsuda (Yakuza leader) |
| 11 | - | cover reprint (on interior page) | 1 | pencils: Mark A. Moretti; inks: Tom Ryder; colors: Stu Suchit | Ninjak [Colin King]; X-O Manowar [Aric] |
| 12 | Full Metal Jacket [Part 1] | comic story | 21 | script: Mark A. Moretti; pencils: Kevin Kobasic, Howard Simpson, C. R. Lister; inks: Kathryn Bolinger, Jenifer Marrus; colors: John Cebollero, Knob Row; letters: Rob Johnson, Santiago Vázquez, Rafael Soler; editing: Tony Bedard | Alan Grant (British intelligence agent); Caruso; Col. Neville Alcott; Dr. Silk; Ken Clarkson; Ninjak [Colin King]; Randy Cartier; a Spider Alien; X-O Manowar [Aric] |
| 13 | - | cover reprint (on interior page) | 1 | pencils: Mark A. Moretti; inks: Rodney Ramos; colors: John Cebollero | Ninjak [Colin King]; X-O Manowar [Aric Dacia] |
| 14 | Full Metal Jacket Part 2 | comic story | 21 | script: Mark A. Moretti, Kevin VanHook; pencils: Louis Small Jr.; inks: Kathryn Bolinger, Randy Elliott; colors: Knob Row, Carol VanHook; letters: Rob Johnson, Santiago Vázquez; editing: Tony Bedard, Julie Crimmins | Alan Grant; Caruso; Dr. Silk; Fitzhugh; Neville Alcott; Ninjak [Colin King]; a Spider Alien; X-O Manowar [Aric Dacia] |
| 15 | Birth of a Super-Spy! | cover reprint (on interior page) | 1 | pencils: Mark A. Moretti; inks: Bob McLeod; colors: Kathryn Bolinger | Colin King; Kyoko; Matsuoka |
| 16 | Hope and Glory | comic story | 24 | script: Mark A. Moretti; pencils: Mark A. Moretti; inks: Dick Giordano; colors: Mark Pusateri; letters: Jade; editing: Madeleine Robins | Abnett; Captain Jonathan King; Catherine Harland; Colin King; Dr. Marcus Bodine; Dr. Silk; Fitzhugh; Goro Sanada; Hideyoshi Iwatsu; Kyoko; Jessica Alcott; Jillian Alcott; Lord Colin Blaxland; Matsuoka; Michiko Okubo; Neville Alcott; Yusaku Okubo |
| 17 | The Origin Concludes! | cover reprint (on interior page) | 1 | pencils: Mark A. Moretti; inks: Bob McLeod; colors: Kathryn Bolinger | Dr. Silk; Ninjak [Colin King] |
| 18 | Bitter Beginnings | comic story | 24 | script: Mark A. Moretti; pencils: Mark A. Moretti; inks: Dick Giordano; colors: Mark Pusateri; letters: Santiago Vázquez; editing: Madeleine Robins | Captain Jonathan King; Catherine Harland; Dr. Marcus Bodine; Dr. Silk; Fitzhugh; Goro Sanada; Hideyoshi Iwatsu; Kyoko; Matsuoka; Michiko Okubo; Neville Alcott; Ninjak [Colin King]; Yusaku Okubo |
| 19 | Gallery | illustration | | pencils: Joe Quesada | Ninjak |